Research projects and smaller learning notes.

PathOS is the main research project here. Smaller experiments and workshop notes stay separate from the flagship project list.

Lab Projects

Research and experimental builds with enough substance for a full Details page.

External evaluation confusion matrix for the PathOS HistoEncoder TransMIL model.
AI & Computer VisionExperimentalNo public repo

PathOS / Prostate Lesion Detection

Research pipeline for prostate whole-slide images using OpenSlide preprocessing, HistoEncoder/Virchow2 embeddings, artifact gating, ABMIL/TransMIL, QWK evaluation, and attention heatmaps.

Python 3.12PyTorchCUDA+12
2025-2026Details
Basic agent interaction diagram showing user input, agent call, LLM call, and returned output.
LLM & Agentic SystemsExperimentalSource available

Agno Agentic Programming Demos

Learning lab with runnable examples for Agno agents, Gemini tools, Pydantic output, LanceDB RAG, and SQLite session memory.

PythonAgnoGoogle Gemini+8
CNN training and validation accuracy and loss curves for the pneumonia detection lab.
AI & Computer VisionExperimentalSource available

Pneumonia Detection Lab

Educational chest X-ray lab comparing handcrafted-feature logistic regression and CNN models for Normal vs Pneumonia prediction.

PythonJupyter NotebookTensorFlow/Keras+10
2024-2025DetailsGitHub
Detected coin overlay with red circles marking validated coin regions.
AI & Computer VisionExperimentalSource available

Automated Coin Counting

Academic CV experiment that segments coin images, validates circular regions, groups coin sizes, and compares detected counts with labels.

PythonTkinterPillow+7
2024-2025DetailsGitHub

Research & Workshop Notes

Smaller learning, teaching, and workshop artifacts kept separate from project cards.

Research2025-2026

PathOS / Prostate WSI Research

Experimental prostate WSI pipeline using OpenSlide preprocessing, HistoEncoder/Virchow2 embeddings, artifact gating, ABMIL/TransMIL, QWK evaluation, and attention heatmaps. Private repo; no clinical product claim.

OpenSlidePyTorchHistoEncoderVirchow2ABMILTransMILQWK
Workshop2024

AI Bootcamp

Workshop notes and learning material used for AI teaching and community sessions.

AI EducationPythonCommunity